EnhancerDB
  1. Home
  2. SNP
  3. rs188748754[chr16:1336587]
Enhancers that have rs188748754[chr16:1336587]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188748754[chr16:1336587]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1334242 1336744 ZNF143 GTRD no Epithelial (MCF-7) 21684511
chr16 1335058 1337360 TCF7L2 GTRD no Colon (HCT116) 21684516
chr16 1335602 1337325 ZNF143 GTRD no Epithelial (MCF-7) 21684519
chr16 1335832 1336622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684521
chr16 1336378 1337234 TCF7L2 GTRD no Colon (HCT116) 21684530
chr16 1336472 1337052 TCF7L2 GTRD no Colon (HCT116) 21684531
chr16 1336515 1337444 ZNF143 GTRD no Epithelial (MCF-7) 21684532
chr16 1336562 1337537 TCF7L2 GTRD no Colon (HCT116) 21684533
chr16 1336565 1338880 ZNF143 GTRD no Epithelial (MCF-7) 21684534
chr16 1336576 1336589 SMAD2 JASPAR yes 9148040
chr16 1336584 1336593 SNAI2 JASPAR yes 9148041
chr16 1336584 1336594 FIGLA JASPAR yes 9148042
chr16 1336584 1336594 TCF4 JASPAR yes 9148043
chr16 1336586 1336595 ZEB1 JASPAR yes 9148044
Genes associated with rs188748754[chr16:1336587], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More