EnhancerDB
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  3. rs188770379[chr1:23919319]
Enhancers that have rs188770379[chr1:23919319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs188770379[chr1:23919319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23919316 23919323 NFATC2 JASPAR yes 27444763
chr1 23919319 23919331 IRF1 JASPAR yes 27444764
chr1 23919319 23919337 ESR1 JASPAR yes 27444765
Genes associated with rs188770379[chr1:23919319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More