EnhancerDB
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  3. rs188794180[chr1:55334151]
Enhancers that have rs188794180[chr1:55334151]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55319988 55335735 enh370
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Liver Astrocyte Bone (Osteoblast) Lung (A549) Stomach Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs188794180[chr1:55334151]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55334141 55334156 FOXP1 JASPAR yes 29002734
chr1 55334141 55334162 IRF1 JASPAR yes 29002735
chr1 55334143 55334155 FOXC2 JASPAR yes 29002736
chr1 55334144 55334155 FOXP2 JASPAR yes 29002737
chr1 55334145 55334160 STAT2 JASPAR yes 29002738
chr1 55334146 55334158 IRF1 JASPAR yes 29002739
Genes associated with rs188794180[chr1:55334151], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More