EnhancerDB
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  3. rs188798641[chr17:46554728]
Enhancers that have rs188798641[chr17:46554728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs188798641[chr17:46554728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46554721 46554736 MEF2A JASPAR yes 54587241
chr17 46554722 46554732 POU6F2 JASPAR yes 54587242
chr17 46554723 46554733 EVX2 JASPAR yes 54587243
chr17 46554723 46554733 LHX2 JASPAR yes 54587244
chr17 46554723 46554733 MEOX1 JASPAR yes 54587245
chr17 46554723 46554733 MEOX2 JASPAR yes 54587246
chr17 46554723 46554733 NOTO JASPAR yes 54587247
chr17 46554723 46554733 POU6F1 JASPAR yes 54587248
chr17 46554723 46554735 MEF2B JASPAR yes 54587249
chr17 46554724 46554732 LBX1 JASPAR yes 54587250
chr17 46554724 46554732 PDX1 JASPAR yes 54587251
chr17 46554724 46554732 VAX1 JASPAR yes 54587252
chr17 46554724 46554732 VAX2 JASPAR yes 54587253
chr17 46554724 46554732 VSX1 JASPAR yes 54587254
chr17 46554724 46554732 VSX2 JASPAR yes 54587255
chr17 46554724 46554734 MEF2A JASPAR yes 54587256
Genes associated with rs188798641[chr17:46554728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More