EnhancerDB
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  3. rs188799652[chr1:154807897]
Enhancers that have rs188799652[chr1:154807897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs188799652[chr1:154807897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154807892 154807900 TBX5 JASPAR yes 32316496
chr1 154807892 154807901 ZEB1 JASPAR yes 32316497
chr1 154807892 154807904 PKNOX1 JASPAR yes 32316498
chr1 154807892 154807904 PKNOX2 JASPAR yes 32316499
chr1 154807893 154807903 ID4 JASPAR yes 32316500
chr1 154807893 154807903 NHLH1 JASPAR yes 32316501
chr1 154807893 154807903 TCF3 JASPAR yes 32316502
chr1 154807893 154807903 TCF4 JASPAR yes 32316503
chr1 154807894 154807903 SNAI2 JASPAR yes 32316504
chr1 154807895 154807900 USF2 TRANSFAC yes 32316505
Genes associated with rs188799652[chr1:154807897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More