EnhancerDB
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  3. rs188827379[chr3:8535929]
Enhancers that have rs188827379[chr3:8535929]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8521125 8537215 enh20309
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Liver Bone (Osteoblast) Lung Stomach Placenta Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs188827379[chr3:8535929]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8535921 8535938 RARA JASPAR yes 296437
chr3 8535921 8535939 NFYA JASPAR yes 296438
chr3 8535926 8535936 EN2 JASPAR yes 296439
chr3 8535926 8535936 ESX1 JASPAR yes 296440
chr3 8535926 8535936 GBX1 JASPAR yes 296441
chr3 8535926 8535936 GBX2 JASPAR yes 296442
chr3 8535926 8535936 GSX2 JASPAR yes 296443
chr3 8535926 8535936 HESX1 JASPAR yes 296444
chr3 8535926 8535936 LBX2 JASPAR yes 296445
chr3 8535926 8535936 LHX2 JASPAR yes 296446
chr3 8535926 8535936 MIXL1 JASPAR yes 296447
chr3 8535926 8535936 RAX JASPAR yes 296448
chr3 8535927 8535935 BARX1 JASPAR yes 296449
chr3 8535927 8535935 BSX JASPAR yes 296450
chr3 8535927 8535935 EN1 JASPAR yes 296451
chr3 8535927 8535935 ISX JASPAR yes 296452
chr3 8535927 8535935 LHX9 JASPAR yes 296453
chr3 8535927 8535935 MSX1 JASPAR yes 296454
chr3 8535927 8535935 MSX2 JASPAR yes 296455
chr3 8535927 8535935 PRRX1 JASPAR yes 296456
chr3 8535927 8535935 RAX2 JASPAR yes 296457
chr3 8535927 8535935 SHOX JASPAR yes 296458
Genes associated with rs188827379[chr3:8535929], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More