EnhancerDB
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  3. rs188827659[chr1:167236625]
Enhancers that have rs188827659[chr1:167236625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167228665 167248455 enh705
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs188827659[chr1:167236625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167236617 167236627 HOXD11 JASPAR yes 32855741
chr1 167236617 167236628 HOXC11 JASPAR yes 32855742
chr1 167236617 167236628 HOXC12 JASPAR yes 32855743
chr1 167236625 167236640 FOXP1 JASPAR yes 32855744
chr1 167236625 167236646 IRF1 JASPAR yes 32855745
Genes associated with rs188827659[chr1:167236625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More