EnhancerDB
  1. Home
  2. SNP
  3. rs188856380[chr10:29982407]
Enhancers that have rs188856380[chr10:29982407]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29973883 29985335 enh62024
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs188856380[chr10:29982407]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29982400 29982410 HOXB13 JASPAR yes 126340140
chr10 29982400 29982416 POU4F3 JASPAR yes 126340141
chr10 29982402 29982416 POU4F1 JASPAR yes 126340142
chr10 29982402 29982417 HNF1A JASPAR yes 126340143
chr10 29982404 29982410 TBP TRANSFAC yes 126340144
Genes associated with rs188856380[chr10:29982407], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More