EnhancerDB
  1. Home
  2. SNP
  3. rs188859668[chr1:175198854]
Enhancers that have rs188859668[chr1:175198854]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175184751 175208860 enh747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Heart
Transcript factors that have rs188859668[chr1:175198854]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175198841 175198857 RFX5 JASPAR yes 33276089
chr1 175198842 175198861 RFX2 JASPAR yes 33276090
Genes associated with rs188859668[chr1:175198854], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More