EnhancerDB
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  3. rs188959975[chr17:41662320]
Enhancers that have rs188959975[chr17:41662320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41660060 41681235 enh17172
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs188959975[chr17:41662320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41661954 41662518 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760989
chr17 41661957 41662573 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760990
chr17 41661996 41662386 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760992
chr17 41661998 41662622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760993
chr17 41662051 41662391 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760995
chr17 41662074 41662454 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760996
chr17 41662115 41662451 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760997
chr17 41662137 41662435 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760998
chr17 41662147 41662423 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21760999
chr17 41662153 41663131 ZNF274 GTRD no Cervix (HeLa-S3) 21761000
chr17 41662160 41662450 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761001
chr17 41662165 41663606 ZNF274 GTRD no Cervix (HeLa-S3) 21761002
chr17 41662183 41662473 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761003
chr17 41662184 41662444 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761004
chr17 41662193 41662399 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761005
chr17 41662232 41662400 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761006
chr17 41662235 41662418 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761007
chr17 41662261 41663254 ZNF274 GTRD no Liver (HepG2) 21761008
chr17 41662285 41662469 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761009
chr17 41662299 41662420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21761010
chr17 41662309 41662324 FOXP1 JASPAR yes 54357179
chr17 41662313 41662321 GATA3 JASPAR yes 54357180
chr17 41662319 41662323 NFE TRANSFAC yes 54357181
chr17 41662319 41662324 GATA1 TRANSFAC yes 54357182
chr17 41662319 41662325 GATA3 JASPAR yes 54357183
Genes associated with rs188959975[chr17:41662320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More