EnhancerDB
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  3. rs188972579[chr1:48368409]
Enhancers that have rs188972579[chr1:48368409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 48358105 48374045 enh42953
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs188972579[chr1:48368409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 48368399 48368410 E2F6 JASPAR yes 28716217
chr1 48368402 48368410 TBX15 JASPAR yes 28716218
chr1 48368404 48368418 PLAG1 JASPAR yes 28716219
chr1 48368409 48368430 REST JASPAR yes 28716220
Genes associated with rs188972579[chr1:48368409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More