EnhancerDB
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  3. rs189031525[chr1:28460005]
Enhancers that have rs189031525[chr1:28460005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28446825 28468055 enh182
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Stomach
Transcript factors that have rs189031525[chr1:28460005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28459996 28460006 NFATC3 JASPAR yes 27744826
chr1 28459997 28460010 EOMES JASPAR yes 27744828
chr1 28459999 28460009 TBR1 JASPAR yes 27744829
chr1 28459999 28460010 TBX2 JASPAR yes 27744830
chr1 28460001 28460009 TBX5 JASPAR yes 27744831
Genes associated with rs189031525[chr1:28460005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More