EnhancerDB
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  3. rs189040008[chr6:42538426]
Enhancers that have rs189040008[chr6:42538426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42529545 42539789 enh9123
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Stomach
Transcript factors that have rs189040008[chr6:42538426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42538405 42538426 IRF1 JASPAR yes 101731319
chr6 42538410 42538430 RREB1 JASPAR yes 101731322
chr6 42538412 42538432 RREB1 JASPAR yes 101731323
chr6 42538413 42538433 RREB1 JASPAR yes 101731324
chr6 42538416 42538436 RREB1 JASPAR yes 101731325
chr6 42538417 42538437 RREB1 JASPAR yes 101731327
chr6 42538420 42538432 FOXI1 JASPAR yes 101731328
chr6 42538423 42538438 FOXA1 JASPAR yes 101731329
chr6 42538424 42538436 FOXI1 JASPAR yes 101731330
chr6 42538424 42538439 FOXP1 JASPAR yes 101731331
chr6 42538425 42538437 FOXC2 JASPAR yes 101731332
Genes associated with rs189040008[chr6:42538426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More