EnhancerDB
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  3. rs189065228[chr1:178550899]
Enhancers that have rs189065228[chr1:178550899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178528505 178560595 enh755
Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Neural Stem Cells (H9) Heart
Transcript factors that have rs189065228[chr1:178550899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178550320 178550916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21352610
chr1 178550320 178550916 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107847409
chr1 178550674 178551010 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847428
chr1 178550744 178551014 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847429
chr1 178550748 178550992 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107847430
chr1 178550890 178550903 ELF3 JASPAR yes 33425886
chr1 178550891 178550905 SPI1 JASPAR yes 33425887
Genes associated with rs189065228[chr1:178550899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More