EnhancerDB
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  3. rs189163189[chr12:117028068]
Enhancers that have rs189163189[chr12:117028068]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189163189[chr12:117028068]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117027106 117028722 TCF7L2 GTRD no Colon (HCT116) 21577514
chr12 117027517 117028559 ZNF143 GTRD no Epithelial (MCF-7) 21577515
chr12 117027615 117028168 ZNF143 GTRD no Epithelial (MCF-7) 21577516
chr12 117027635 117028132 TCF7L2 GTRD no Colon (HCT116) 21577517
chr12 117027645 117028074 ZNF274 GTRD no Bone Marrow (K562) 21577518
chr12 117028027 117028701 ZNF143 GTRD no Epithelial (MCF-7) 21577519
chr12 117028034 117028784 ZNF143 GTRD no Epithelial (MCF-7) 21577520
chr12 117028058 117028068 SREBF2 JASPAR yes 124011871
chr12 117028058 117028069 USF1 JASPAR yes 124011872
chr12 117028058 117028069 USF2 JASPAR yes 124011873
chr12 117028061 117028074 NFKB1 JASPAR yes 124011874
chr12 117028066 117028072 ZNF354C JASPAR yes 124011875
Genes associated with rs189163189[chr12:117028068], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More