EnhancerDB
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  3. rs189216549[chr1:212654342]
Enhancers that have rs189216549[chr1:212654342]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs189216549[chr1:212654342]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212654327 212654342 LEF1 JASPAR yes 35128091
Genes associated with rs189216549[chr1:212654342], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More