EnhancerDB
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  3. rs189234828[chr1:25019851]
Enhancers that have rs189234828[chr1:25019851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189234828[chr1:25019851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25019832 25019852 RREB1 JASPAR yes 27519061
chr1 25019832 25019853 IRF1 JASPAR yes 27519062
chr1 25019833 25019854 IRF1 JASPAR yes 27519063
chr1 25019838 25019859 IRF1 JASPAR yes 27519065
chr1 25019839 25019854 FOXP1 JASPAR yes 27519067
chr1 25019839 25019860 IRF1 JASPAR yes 27519068
chr1 25019840 25019851 FOXP2 JASPAR yes 27519069
chr1 25019840 25019852 FOXC2 JASPAR yes 27519070
chr1 25019840 25019855 STAT2 JASPAR yes 27519071
chr1 25019840 25019860 RREB1 JASPAR yes 27519072
chr1 25019841 25019856 FOXP1 JASPAR yes 27519073
chr1 25019843 25019858 FOXP1 JASPAR yes 27519074
chr1 25019844 25019859 FOXP1 JASPAR yes 27519075
chr1 25019844 25019864 RREB1 JASPAR yes 27519076
chr1 25019845 25019860 FOXP1 JASPAR yes 27519077
chr1 25019845 25019866 IRF1 JASPAR yes 27519078
chr1 25019849 25019869 RREB1 JASPAR yes 27519079
chr1 25019851 25019866 FOXA1 JASPAR yes 27519080
Genes associated with rs189234828[chr1:25019851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More