EnhancerDB
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  3. rs189272090[chr1:3228967]
Enhancers that have rs189272090[chr1:3228967]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3220368 3259315 enh11429
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189272090[chr1:3228967]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3228958 3228973 TFAP2A JASPAR yes 26278240
chr1 3228958 3228973 TFAP2C JASPAR yes 26278241
chr1 3228960 3228973 TFAP2A JASPAR yes 26278242
chr1 3228960 3228973 TFAP2B JASPAR yes 26278243
chr1 3228960 3228973 TFAP2C JASPAR yes 26278244
chr1 3228960 3228975 TFAP2A JASPAR yes 26278245
chr1 3228961 3228973 TFAP2B JASPAR yes 26278246
chr1 3228961 3228973 TFAP2C JASPAR yes 26278247
Genes associated with rs189272090[chr1:3228967], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More