EnhancerDB
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  3. rs189301635[chr17:53511256]
Enhancers that have rs189301635[chr17:53511256]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189301635[chr17:53511256]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53510495 53511577 POLR2A UCSC Txn Factor no Conserved 108273048
chr17 53510998 53511314 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772574
chr17 53511012 53511372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772575
chr17 53511036 53511268 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772576
chr17 53511071 53511547 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772577
chr17 53511077 53511295 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772578
chr17 53511121 53511457 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772579
chr17 53511123 53511519 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772580
chr17 53511129 53511469 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772581
chr17 53511131 53511515 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772582
chr17 53511135 53511479 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772583
chr17 53511138 53511508 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772584
chr17 53511140 53511530 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772585
chr17 53511146 53511416 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772586
chr17 53511146 53511426 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772587
chr17 53511154 53511484 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772588
chr17 53511157 53511433 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772589
chr17 53511158 53511488 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772590
chr17 53511161 53511461 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772591
chr17 53511174 53511448 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772592
chr17 53511176 53511402 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772593
chr17 53511177 53511437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772594
chr17 53511183 53511407 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772595
chr17 53511183 53511444 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772596
chr17 53511193 53511369 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772597
chr17 53511205 53511435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772598
chr17 53511210 53511434 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772599
chr17 53511212 53511424 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772600
chr17 53511217 53511328 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772601
chr17 53511225 53511319 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772602
chr17 53511243 53511260 RARA JASPAR yes 54849932
chr17 53511245 53511260 HNF4G JASPAR yes 54849933
chr17 53511245 53511260 NR2C2 JASPAR yes 54849934
chr17 53511246 53511260 NR2F1 JASPAR yes 54849935
chr17 53511246 53511260 RXRB JASPAR yes 54849936
chr17 53511246 53511260 RXRG JASPAR yes 54849937
chr17 53511246 53511261 HNF4A JASPAR yes 54849938
chr17 53511248 53511498 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772603
chr17 53511251 53511262 ESRRA JASPAR yes 54849940
chr17 53511251 53511264 NR2F1 JASPAR yes 54849941
chr17 53511252 53511270 ESR2 JASPAR yes 54849942
chr17 53511253 53511261 NR4A2 JASPAR yes 54849943
chr17 53511254 53511269 ESR2 JASPAR yes 54849944
chr17 53511255 53511259 ESR1 TRANSFAC yes 54849945
Genes associated with rs189301635[chr17:53511256], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More