EnhancerDB
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  3. rs189314444[chr17:55681272]
Enhancers that have rs189314444[chr17:55681272]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs189314444[chr17:55681272]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55681256 55681274 IRF2 JASPAR yes 54974159
chr17 55681259 55681274 PRDM1 JASPAR yes 54974160
chr17 55681261 55681273 IRF1 JASPAR yes 54974161
chr17 55681261 55681275 IRF8 JASPAR yes 54974162
chr17 55681261 55681276 IRF9 JASPAR yes 54974163
Genes associated with rs189314444[chr17:55681272], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More