EnhancerDB
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  3. rs189316978[chr1:202019574]
Enhancers that have rs189316978[chr1:202019574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs189316978[chr1:202019574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202008954 202021472 ZBTB33 GTRD no Lung (A549) 107857529
chr1 202009111 202020493 ZBTB33 GTRD no Lung (A549) 107857530
chr1 202014763 202020119 ZBTB33 GTRD no Lung (A549) 107857531
chr1 202014791 202021226 ZBTB33 GTRD no Lung (A549) 107857532
chr1 202014863 202020026 ZBTB33 GTRD no Lung (A549) 107857539
chr1 202015533 202019697 ZBTB33 GTRD no Lung (A549) 107857543
chr1 202015945 202019617 ZNF274 GTRD no Bone Marrow (K562) 107857556
chr1 202016939 202020131 ZNF143 GTRD no Epithelial (MCF-7) 21365823
chr1 202016998 202019835 ZNF143 GTRD no Epithelial (MCF-7) 21365824
chr1 202017009 202020324 ZNF143 GTRD no Epithelial (MCF-7) 21365825
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365826
chr1 202017017 202024420 ZNF143 GTRD no Epithelial (MCF-7) 21365827
chr1 202017089 202019649 ZNF143 GTRD no Epithelial (MCF-7) 21365828
chr1 202017146 202019621 ZNF143 GTRD no Epithelial (MCF-7) 21365829
chr1 202017151 202020275 ZNF143 GTRD no Epithelial (MCF-7) 21365830
chr1 202017157 202019958 ZNF143 GTRD no Epithelial (MCF-7) 21365831
chr1 202017163 202019592 ZNF143 GTRD no Epithelial (MCF-7) 21365832
chr1 202017169 202020675 ZNF143 GTRD no Epithelial (MCF-7) 21365833
chr1 202017190 202019670 ZNF143 GTRD no Epithelial (MCF-7) 21365834
chr1 202017198 202019882 ZNF143 GTRD no Epithelial (MCF-7) 21365835
chr1 202017242 202019887 ZNF143 GTRD no Epithelial (MCF-7) 21365836
chr1 202017245 202019658 ZNF143 GTRD no Epithelial (MCF-7) 21365837
chr1 202017246 202019813 ZNF143 GTRD no Epithelial (MCF-7) 21365839
chr1 202017249 202019927 ZNF143 GTRD no Epithelial (MCF-7) 21365840
chr1 202017270 202020252 ZNF143 GTRD no Epithelial (MCF-7) 21365843
chr1 202017276 202019869 ZNF143 GTRD no Epithelial (MCF-7) 21365844
chr1 202017419 202020296 TCF7L2 GTRD no Colon (HCT116) 21365851
chr1 202017434 202019677 ZNF143 GTRD no Epithelial (MCF-7) 21365852
chr1 202017478 202019848 ZNF143 GTRD no Epithelial (MCF-7) 21365857
chr1 202017500 202019631 ZNF143 GTRD no Epithelial (MCF-7) 21365858
chr1 202017502 202020107 ZNF274 GTRD no Cervix (HeLa-S3) 21365859
chr1 202017505 202019646 ZNF143 GTRD no Epithelial (MCF-7) 21365860
chr1 202017534 202019631 TCF7L2 GTRD no Colon (HCT116) 21365861
chr1 202017558 202019681 ZNF143 GTRD no Epithelial (MCF-7) 21365862
chr1 202017656 202020495 ZNF274 GTRD no Cervix (HeLa-S3) 21365865
chr1 202018228 202019598 ZNF143 GTRD no Epithelial (MCF-7) 21365902
chr1 202019450 202019757 ZNF143 GTRD no Epithelial (MCF-7) 21365953
chr1 202019537 202020036 ZNF143 GTRD no Epithelial (MCF-7) 21365954
chr1 202019570 202019590 RREB1 JASPAR yes 34546798
chr1 202019572 202019592 RREB1 JASPAR yes 34546799
Genes associated with rs189316978[chr1:202019574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More