EnhancerDB
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  3. rs189535475[chr1:228074960]
Enhancers that have rs189535475[chr1:228074960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr1 228074836 228075224 vista5403
VISTA
Transcript factors that have rs189535475[chr1:228074960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228074711 228076085 TCF7L2 GTRD no Colon (HCT116) 107876779
chr1 228074795 228076498 ZNF274 GTRD no Blood (GM12878) 107876780
chr1 228074822 228075132 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388283
chr1 228074822 228075132 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107876781
chr1 228074828 228075104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21388284
chr1 228074828 228075104 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107876782
chr1 228074833 228076722 ZNF274 GTRD no Cervix (HeLa-S3) 21388285
chr1 228074833 228076722 ZNF274 GTRD no Cervix (HeLa-S3) 107876783
chr1 228074929 228075856 ZNF274 GTRD no Bone Marrow (K562) 21388286
chr1 228074929 228075856 ZNF274 GTRD no Bone Marrow (K562) 107876784
chr1 228074937 228076387 ZNF274 GTRD no Blood (GM12878) 107876785
chr1 228074949 228074968 CTCF JASPAR yes 35890626
chr1 228074949 228074968 CTCF JASPAR yes 118473489
Genes associated with rs189535475[chr1:228074960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More