EnhancerDB
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  3. rs189558704[chr1:154463193]
Enhancers that have rs189558704[chr1:154463193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154447249 154470672 enh12277
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Pancreas (Panc1) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs189558704[chr1:154463193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154463186 154463198 PKNOX2 JASPAR yes 32296329
chr1 154463187 154463197 ID4 JASPAR yes 32296330
chr1 154463187 154463197 TCF4 JASPAR yes 32296331
chr1 154463188 154463203 RFX5 JASPAR yes 32296332
chr1 154463191 154463200 NFIX JASPAR yes 32296333
chr1 154463191 154463201 NFIA JASPAR yes 32296334
chr1 154463193 154463199 NFIC JASPAR yes 32296335
Genes associated with rs189558704[chr1:154463193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More