EnhancerDB
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  3. rs189655941[chr5:171538417]
Enhancers that have rs189655941[chr5:171538417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171526400 171541439 enh8877
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs189655941[chr5:171538417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171538408 171538426 ESR1 JASPAR yes 67763479
chr5 171538409 171538424 TFAP2C JASPAR yes 67763480
chr5 171538411 171538425 EBF1 JASPAR yes 67763482
chr5 171538412 171538423 EBF1 JASPAR yes 67763483
chr5 171538413 171538419 MZF1 JASPAR yes 67763484
chr5 171538414 171538423 TFAP2A JASPAR yes 67763485
Genes associated with rs189655941[chr5:171538417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More