EnhancerDB
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  3. rs189719636[chr12:125092560]
Enhancers that have rs189719636[chr12:125092560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125086525 125100115 enh2675
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
Transcript factors that have rs189719636[chr12:125092560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125091871 125093132 TCF7L2 GTRD no Colon (HCT116) 21581212
chr12 125091897 125093893 TCF7L2 GTRD no Colon (HCT116) 21581213
chr12 125092122 125093166 TCF7L2 GTRD no Colon (HCT116) 21581214
chr12 125092128 125093572 P63 GTRD no Skin (Keratinocyte) 21581215
chr12 125092302 125093425 ZNF143 GTRD no Epithelial (MCF-7) 21581216
chr12 125092316 125093413 AR GTRD no Prostate (PC-3) 21581217
chr12 125092318 125093033 ZNF143 GTRD no Epithelial (MCF-7) 21581218
chr12 125092370 125093305 ZNF143 GTRD no Epithelial (MCF-7) 21581219
chr12 125092394 125093426 ZNF143 GTRD no Epithelial (MCF-7) 21581220
chr12 125092409 125092947 TCF7L2 GTRD no Colon (HCT116) 21581221
chr12 125092429 125093981 ZNF143 GTRD no Epithelial (MCF-7) 21581222
chr12 125092433 125094235 ZNF143 GTRD no Epithelial (MCF-7) 21581223
chr12 125092436 125094201 ZNF143 GTRD no Epithelial (MCF-7) 21581224
chr12 125092446 125093096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581225
chr12 125092447 125094084 ZNF143 GTRD no Epithelial (MCF-7) 21581226
chr12 125092454 125094201 ZNF143 GTRD no Epithelial (MCF-7) 21581227
chr12 125092483 125093044 ZNF274 GTRD no Bone Marrow (K562) 21581228
chr12 125092495 125092763 ZNF143 GTRD no Epithelial (MCF-7) 21581229
chr12 125092504 125092873 ZNF143 GTRD no Epithelial (MCF-7) 21581230
chr12 125092559 125092574 MEF2A JASPAR yes 124398169
chr12 125092560 125092575 MEF2C JASPAR yes 124398170
Genes associated with rs189719636[chr12:125092560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More