EnhancerDB
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  3. rs189729012[chr1:40456222]
Enhancers that have rs189729012[chr1:40456222]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs189729012[chr1:40456222]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40456213 40456223 ID4 JASPAR yes 28305886
chr1 40456213 40456223 TCF4 JASPAR yes 28305887
chr1 40456216 40456224 TBX15 JASPAR yes 28305888
chr1 40456216 40456224 TBX1 JASPAR yes 28305889
chr1 40456216 40456224 TBX4 JASPAR yes 28305890
chr1 40456216 40456224 TBX5 JASPAR yes 28305891
chr1 40456220 40456231 NRL JASPAR yes 28305892
Genes associated with rs189729012[chr1:40456222], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More