EnhancerDB
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Enhancers that have rs189884708[chr17:39699610]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs189884708[chr17:39699610]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39698423 39704417 ZNF274 GTRD no Liver (HepG2) 108258721
chr17 39698423 39704417 ZNF274 GTRD no Liver (HepG2) 108258722
chr17 39698872 39704440 ZBTB33 GTRD no Lung (A549) 21757673
chr17 39698872 39704440 ZBTB33 GTRD no Lung (A549) 108258723
chr17 39698872 39704440 ZBTB33 GTRD no Lung (A549) 108258724
chr17 39698902 39704314 ZBTB33 GTRD no Lung (A549) 21757674
chr17 39698902 39704314 ZBTB33 GTRD no Lung (A549) 108258725
chr17 39698902 39704314 ZBTB33 GTRD no Lung (A549) 108258726
chr17 39698974 39700981 ZBTB33 GTRD no Lung (A549) 21757675
chr17 39699311 39700442 ZBTB33 GTRD no Lung (A549) 21757676
chr17 39699333 39700243 ZBTB33 GTRD no Lung (A549) 21757677
chr17 39699358 39704306 ZBTB33 GTRD no Lung (A549) 21757678
chr17 39699358 39704306 ZBTB33 GTRD no Lung (A549) 108258727
chr17 39699358 39704306 ZBTB33 GTRD no Lung (A549) 108258728
chr17 39699359 39700881 ZBTB33 GTRD no Lung (A549) 21757679
chr17 39699374 39700143 ZBTB33 GTRD no Lung (A549) 21757680
chr17 39699377 39700508 ZBTB33 GTRD no Lung (A549) 21757681
chr17 39699393 39700733 ZBTB33 GTRD no Lung (A549) 21757682
chr17 39699405 39702125 ZNF274 GTRD no Cervix (HeLa-S3) 21757683
chr17 39699418 39700500 ZBTB33 GTRD no Lung (A549) 21757684
chr17 39699443 39700851 ZBTB33 GTRD no Lung (A549) 21757685
chr17 39699469 39701253 TCF7L2 GTRD no Colon (HCT116) 21757686
chr17 39699474 39704149 ZNF274 GTRD no Liver (HepG2) 108258729
chr17 39699474 39704149 ZNF274 GTRD no Liver (HepG2) 108258730
chr17 39699491 39700154 ZNF274 GTRD no Cervix (HeLa-S3) 21757687
chr17 39699517 39700758 ZNF143 GTRD no Epithelial (MCF-7) 21757688
chr17 39699527 39700258 ZNF274 GTRD no Cervix (HeLa-S3) 21757689
chr17 39699578 39700526 ZNF143 GTRD no Epithelial (MCF-7) 21757690
chr17 39699582 39701102 TCF7L2 GTRD no Colon (HCT116) 21757691
chr17 39699585 39700275 ZNF274 GTRD no Cervix (HeLa-S3) 21757692
chr17 39699605 39699616 TBX20 JASPAR yes 54263194
chr17 39699605 39700069 ZBTB33 GTRD no Lung (A549) 21757693
chr17 39699606 39699614 TBX15 JASPAR yes 54263195
chr17 39699606 39699617 E2F6 JASPAR yes 54263196
chr17 39699607 39699612 SP1 TRANSFAC yes 54263197
chr17 39699607 39701117 TCF7L2 GTRD no Colon (HCT116) 21757694
chr17 39699610 39699615 ETS2 TRANSFAC yes 54263198
Genes associated with rs189884708[chr17:39699610], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More