EnhancerDB
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  3. rs189889425[chr12:117033329]
Enhancers that have rs189889425[chr12:117033329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs189889425[chr12:117033329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117032006 117035871 ZNF274 GTRD no Liver (HepG2) 108061826
chr12 117032761 117033879 TCF7L2 GTRD no Colon (HCT116) 21577550
chr12 117032797 117033791 TCF7L2 GTRD no Colon (HCT116) 21577551
chr12 117032806 117033334 ZNF274 GTRD no Bone Marrow (K562) 21577553
chr12 117032835 117033886 ZNF143 GTRD no Epithelial (MCF-7) 21577554
chr12 117032902 117033884 ZNF143 GTRD no Epithelial (MCF-7) 21577555
chr12 117032988 117033846 TCF7L2 GTRD no Colon (HCT116) 21577556
chr12 117033184 117034674 ZNF143 GTRD no Epithelial (MCF-7) 21577557
chr12 117033323 117033342 CTCF JASPAR yes 124012682
chr12 117033326 117033343 RARA JASPAR yes 124012683
chr12 117033329 117033340 EBF1 JASPAR yes 124012684
Genes associated with rs189889425[chr12:117033329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More