EnhancerDB
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Enhancers that have rs189904571[chr17:41671382]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41660060 41681235 enh17172
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung Stomach Muscle (A673) Placenta Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs189904571[chr17:41671382]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41671361 41671382 IRF1 JASPAR yes 54358501
chr17 41671365 41671386 IRF1 JASPAR yes 54358502
chr17 41671367 41671388 IRF1 JASPAR yes 54358504
chr17 41671368 41671383 FOXP1 JASPAR yes 54358505
chr17 41671368 41671389 IRF1 JASPAR yes 54358506
chr17 41671369 41671389 RREB1 JASPAR yes 54358507
chr17 41671369 41671390 IRF1 JASPAR yes 54358508
chr17 41671370 41671385 FOXP1 JASPAR yes 54358509
chr17 41671371 41671386 FOXP1 JASPAR yes 54358510
chr17 41671372 41671387 FOXP1 JASPAR yes 54358511
chr17 41671373 41671388 FOXP1 JASPAR yes 54358512
chr17 41671374 41671389 FOXP1 JASPAR yes 54358513
chr17 41671381 41671387 TCF4 TRANSFAC yes 54358514
Genes associated with rs189904571[chr17:41671382], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More