EnhancerDB
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  3. rs189972696[chr2:25789879]
Enhancers that have rs189972696[chr2:25789879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25779155 25792749 enh5367
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Spleen Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs189972696[chr2:25789879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25789862 25789881 REST JASPAR yes 72487557
chr2 25789879 25789883 LFA1 TRANSFAC yes 72487558
Genes associated with rs189972696[chr2:25789879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More