EnhancerDB
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  3. rs190029839[chr1:53649252]
Enhancers that have rs190029839[chr1:53649252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 53634965 53653615 enh11857
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Bone (Osteoblast) Placenta Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs190029839[chr1:53649252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 53649249 53649259 MAX JASPAR yes 28919438
chr1 53649250 53649260 CLOCK JASPAR yes 28919439
chr1 53649250 53649260 FIGLA JASPAR yes 28919440
chr1 53649250 53649260 MAX JASPAR yes 28919441
chr1 53649250 53649260 MLX JASPAR yes 28919442
chr1 53649250 53649260 MNT JASPAR yes 28919443
chr1 53649250 53649261 USF1 JASPAR yes 28919444
chr1 53649250 53649261 USF2 JASPAR yes 28919445
chr1 53649251 53649258 USF1 JASPAR yes 28919446
chr1 53649251 53649261 MAX JASPAR yes 28919447
chr1 53649252 53649257 MYC TRANSFAC yes 28919448
chr1 53649252 53649257 USF1 TRANSFAC yes 28919449
chr1 53649252 53649257 USF2 TRANSFAC yes 28919450
chr1 53649252 53649259 USF1 JASPAR yes 28919451
Genes associated with rs190029839[chr1:53649252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More