EnhancerDB
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  3. rs190076539[chr1:205639550]
Enhancers that have rs190076539[chr1:205639550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205631965 205647955 enh50152
Large Intestine Prostate (RWPE1) Liver Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs190076539[chr1:205639550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205639364 205640338 ZNF274 GTRD no Liver (HepG2) 107862445
chr1 205639458 205640177 ZNF274 GTRD no Liver (HepG2) 107862446
chr1 205639467 205640179 ZNF274 GTRD no Liver (HepG2) 107862447
chr1 205639482 205640187 ZNF274 GTRD no Liver (HepG2) 107862448
chr1 205639539 205640131 ZNF274 GTRD no Liver (HepG2) 107862449
chr1 205639543 205639557 SPI1 JASPAR yes 34777966
chr1 205639543 205639557 SPIC JASPAR yes 34777967
chr1 205639543 205640185 ZNF274 GTRD no Liver (HepG2) 107862450
Genes associated with rs190076539[chr1:205639550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More