EnhancerDB
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  3. rs190096188[chr19:1215402]
Enhancers that have rs190096188[chr19:1215402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
chr19 1214932 1215433 vista28151
VISTA
Transcript factors that have rs190096188[chr19:1215402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1213167 1215783 ZNF274 GTRD no Blood (GM12878) 108351407
chr19 1213167 1215783 ZNF274 GTRD no Blood (GM12878) 108351408
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 21831910
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 108351417
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 108351418
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 21831913
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 108351424
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 108351425
chr19 1214097 1215883 ZNF143 GTRD no Epithelial (MCF-7) 108351461
chr19 1214097 1215883 ZNF143 GTRD no Epithelial (MCF-7) 108351462
chr19 1214663 1215494 ZNF274 GTRD no Bone Marrow (K562) 21831927
chr19 1214663 1215494 ZNF274 GTRD no Bone Marrow (K562) 108351469
chr19 1214679 1215753 TCF7L2 GTRD no Colon (HCT116) 21831928
chr19 1214679 1215753 TCF7L2 GTRD no Colon (HCT116) 108351470
chr19 1214805 1216132 TCF7L2 GTRD no Colon (HCT116) 21831931
chr19 1214805 1216132 TCF7L2 GTRD no Colon (HCT116) 108351474
chr19 1214918 1215615 ZBTB33 GTRD no Brain (SK-N-SH) 21831933
chr19 1214918 1215615 ZBTB33 GTRD no Brain (SK-N-SH) 108351476
chr19 1214949 1215767 ZBTB33 GTRD no Brain (SK-N-SH) 21831934
chr19 1214949 1215767 ZBTB33 GTRD no Brain (SK-N-SH) 108351477
chr19 1215040 1215546 ZBTB33 GTRD no Brain (SK-N-SH) 21831935
chr19 1215040 1215546 ZBTB33 GTRD no Brain (SK-N-SH) 108351478
chr19 1215083 1215693 ZNF274 GTRD no Blood (GM12878) 108351479
chr19 1215095 1215749 TCF7L2 GTRD no Colon (HCT116) 21831936
chr19 1215095 1215749 TCF7L2 GTRD no Colon (HCT116) 108351480
chr19 1215113 1215916 TCF7L2 GTRD no Colon (HCT116) 21831937
chr19 1215113 1215916 TCF7L2 GTRD no Colon (HCT116) 108351481
chr19 1215138 1215897 ZNF143 GTRD no Epithelial (MCF-7) 108351482
chr19 1215155 1217561 AR GTRD no Prostate (PC-3) 108351483
chr19 1215216 1215554 ZNF274 GTRD no Blood (GM12878) 108351484
chr19 1215258 1215978 ZNF143 GTRD no Epithelial (MCF-7) 108351485
chr19 1215319 1215854 ZNF143 GTRD no Epithelial (MCF-7) 108351486
chr19 1215320 1215708 ZNF274 GTRD no Liver (HepG2) 21831938
chr19 1215320 1215708 ZNF274 GTRD no Liver (HepG2) 108351487
chr19 1215320 1215828 ZNF143 GTRD no Epithelial (MCF-7) 108351488
chr19 1215378 1215830 ZNF143 GTRD no Epithelial (MCF-7) 108351489
chr19 1215397 1215416 REST JASPAR yes 70779680
chr19 1215397 1215416 REST JASPAR yes 112003574
chr19 1215398 1215402 LFA1 TRANSFAC yes 70779681
chr19 1215398 1215402 LFA1 TRANSFAC yes 112003575
Genes associated with rs190096188[chr19:1215402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More