EnhancerDB
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  3. rs190155417[chr1:228962235]
Enhancers that have rs190155417[chr1:228962235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs190155417[chr1:228962235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228962218 228962239 IRF1 JASPAR yes 35932505
chr1 228962222 228962237 STAT2 JASPAR yes 35932507
chr1 228962223 228962235 IRF1 JASPAR yes 35932508
chr1 228962228 228962237 SRY JASPAR yes 35932509
chr1 228962229 228962241 PBX1 JASPAR yes 35932510
chr1 228962230 228962244 ONECUT3 JASPAR yes 35932511
chr1 228962232 228962247 FOXP1 JASPAR yes 35932512
Genes associated with rs190155417[chr1:228962235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More