EnhancerDB
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  3. rs190161547[chr5:171575872]
Enhancers that have rs190161547[chr5:171575872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs190161547[chr5:171575872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171575868 171575880 PKNOX2 JASPAR yes 67768045
chr5 171575868 171575880 TGIF1 JASPAR yes 67768046
chr5 171575868 171575881 ZBTB18 JASPAR yes 67768047
Genes associated with rs190161547[chr5:171575872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More