EnhancerDB
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  3. rs190185968[chr1:16279660]
Enhancers that have rs190185968[chr1:16279660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16272606 16295457 enh83
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Adrenal Blood (Karpas-422) Muscle (Myoblast) Uterus Thymus Heart
Transcript factors that have rs190185968[chr1:16279660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16279648 16279660 TEAD1 JASPAR yes 27017303
chr1 16279648 16279663 SOX21 JASPAR yes 27017304
chr1 16279654 16279662 DLX6 JASPAR yes 27017309
chr1 16279654 16279662 MSX2 JASPAR yes 27017310
chr1 16279659 16279663 YY1 TRANSFAC yes 27017311
Genes associated with rs190185968[chr1:16279660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More