EnhancerDB
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  3. rs190197409[chr12:50092392]
Enhancers that have rs190197409[chr12:50092392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50089605 50099801 enh2335
Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Uterus Thymus Heart
chr12 50092156 50092464 vista13355
VISTA
Transcript factors that have rs190197409[chr12:50092392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50092088 50092758 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108030745
chr12 50092088 50092758 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108030746
chr12 50092151 50092521 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108030747
chr12 50092315 50092671 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108030749
chr12 50092382 50092403 IRF1 JASPAR yes 82401039
chr12 50092382 50092403 IRF1 JASPAR yes 120793143
chr12 50092383 50092673 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108030750
chr12 50092384 50092640 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030751
chr12 50092387 50092667 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030752
chr12 50092391 50092405 IRF7 JASPAR yes 82401040
chr12 50092391 50092405 IRF7 JASPAR yes 120793144
Genes associated with rs190197409[chr12:50092392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More