EnhancerDB
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  3. rs190331335[chr1:180553226]
Enhancers that have rs190331335[chr1:180553226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180547465 180559715 enh12426
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs190331335[chr1:180553226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180552262 180553336 ZNF143 GTRD no Epithelial (MCF-7) 21353751
chr1 180552271 180553283 ZNF143 GTRD no Epithelial (MCF-7) 21353752
chr1 180552338 180553320 ZNF143 GTRD no Epithelial (MCF-7) 21353754
chr1 180552362 180553237 ZNF143 GTRD no Epithelial (MCF-7) 21353756
chr1 180552388 180553244 ZNF143 GTRD no Epithelial (MCF-7) 21353757
chr1 180552402 180553237 ZNF143 GTRD no Epithelial (MCF-7) 21353759
chr1 180552413 180553446 ZNF143 GTRD no Epithelial (MCF-7) 21353760
chr1 180552452 180553257 ZNF143 GTRD no Epithelial (MCF-7) 21353761
chr1 180552454 180553230 ZNF143 GTRD no Epithelial (MCF-7) 21353762
chr1 180552474 180553241 ZNF143 GTRD no Epithelial (MCF-7) 21353763
chr1 180553222 180553227 SP1 TRANSFAC yes 33528367
Genes associated with rs190331335[chr1:180553226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More