EnhancerDB
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  3. rs190450529[chr12:47693037]
Enhancers that have rs190450529[chr12:47693037]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs190450529[chr12:47693037]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47692780 47693300 TCF7L2 GTRD no Colon (HCT116) 21543270
chr12 47693028 47693045 RARA JASPAR yes 120693868
chr12 47693028 47693045 RXRA JASPAR yes 120693869
Genes associated with rs190450529[chr12:47693037], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More