EnhancerDB
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  3. rs190460965[chr19:12895009]
Enhancers that have rs190460965[chr19:12895009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
chr19 12894545 12895330 vista28654
VISTA
Transcript factors that have rs190460965[chr19:12895009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12894582 12895245 EP300 UCSC Txn Factor no Conserved 108386318
chr19 12894629 12895052 NR3C1 UCSC Txn Factor no Conserved 108386321
chr19 12894651 12895245 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386323
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849884
chr19 12894689 12895153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108386324
chr19 12894732 12895218 TCF12 UCSC Txn Factor no Conserved 108386325
chr19 12894732 12895218 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386326
chr19 12894856 12895136 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386328
chr19 12894856 12895156 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386329
chr19 12894872 12895127 FOXA1 UCSC Txn Factor no Conserved 108386330
chr19 12894904 12895127 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386331
chr19 12894909 12895129 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386332
chr19 12894914 12895570 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386333
chr19 12894914 12895570 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108386334
chr19 12894920 12895115 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108386335
chr19 12894973 12895343 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108386336
chr19 12894995 12895015 ESR1 JASPAR yes 70806059
chr19 12894995 12895015 ESR1 JASPAR yes 112493718
chr19 12894998 12895012 FOXF2 JASPAR yes 70806061
chr19 12894998 12895012 FOXF2 JASPAR yes 112493720
chr19 12894999 12895010 FOXA1 JASPAR yes 70806062
chr19 12894999 12895010 FOXA1 JASPAR yes 112493721
chr19 12894999 12895014 FOXA1 JASPAR yes 70806063
chr19 12894999 12895014 FOXA1 JASPAR yes 112493722
chr19 12895000 12895011 FOXB1 JASPAR yes 70806064
chr19 12895000 12895011 FOXC1 JASPAR yes 70806065
chr19 12895000 12895011 FOXB1 JASPAR yes 112493723
chr19 12895000 12895011 FOXC1 JASPAR yes 112493724
chr19 12895000 12895012 FOXC2 JASPAR yes 70806066
chr19 12895000 12895012 FOXC2 JASPAR yes 112493725
chr19 12895001 12895012 FOXP2 JASPAR yes 70806067
chr19 12895001 12895012 FOXP2 JASPAR yes 112493726
chr19 12895003 12895010 FOXD2 JASPAR yes 70806068
chr19 12895003 12895010 FOXI1 JASPAR yes 70806069
chr19 12895003 12895010 FOXL1 JASPAR yes 70806070
chr19 12895003 12895010 FOXO4 JASPAR yes 70806071
chr19 12895003 12895010 FOXO6 JASPAR yes 70806072
chr19 12895003 12895010 FOXP3 JASPAR yes 70806073
chr19 12895003 12895010 FOXD2 JASPAR yes 112493727
chr19 12895003 12895010 FOXI1 JASPAR yes 112493728
chr19 12895003 12895010 FOXL1 JASPAR yes 112493729
chr19 12895003 12895010 FOXO4 JASPAR yes 112493730
chr19 12895003 12895010 FOXO6 JASPAR yes 112493731
chr19 12895003 12895010 FOXP3 JASPAR yes 112493732
chr19 12895003 12895011 FOXD1 JASPAR yes 70806074
chr19 12895003 12895011 FOXG1 JASPAR yes 70806075
chr19 12895003 12895011 FOXO3 JASPAR yes 70806076
chr19 12895003 12895011 FOXD1 JASPAR yes 112493733
chr19 12895003 12895011 FOXG1 JASPAR yes 112493734
chr19 12895003 12895011 FOXO3 JASPAR yes 112493735
chr19 12895005 12895017 YY1 JASPAR yes 70806077
chr19 12895005 12895017 YY1 JASPAR yes 112493736
chr19 12895009 12895027 ESR2 JASPAR yes 70806078
chr19 12895009 12895027 ESR2 JASPAR yes 112493737
Genes associated with rs190460965[chr19:12895009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More