EnhancerDB
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  3. rs190477000[chr16:88275695]
Enhancers that have rs190477000[chr16:88275695]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs190477000[chr16:88275695]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88275269 88276249 TCF7L2 GTRD no Colon (HCT116) 21735598
chr16 88275269 88276249 TCF7L2 GTRD no Colon (HCT116) 108221845
chr16 88275586 88275816 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735599
chr16 88275587 88275877 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21735600
chr16 88275593 88276302 TCF7L2 GTRD no Colon (HCT116) 21735601
chr16 88275593 88276302 TCF7L2 GTRD no Colon (HCT116) 108221846
chr16 88275597 88275821 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21735602
chr16 88275619 88275809 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21735603
Genes associated with rs190477000[chr16:88275695], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More