EnhancerDB
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  3. rs1905338[chr17:40582273]
Enhancers that have rs1905338[chr17:40582273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40578365 40596495 enh17162
Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs1905338[chr17:40582273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40581617 40583253 ZNF143 GTRD no Epithelial (MCF-7) 21758731
chr17 40581673 40583103 ZNF143 GTRD no Epithelial (MCF-7) 21758733
chr17 40581802 40583154 ZNF143 GTRD no Epithelial (MCF-7) 21758734
chr17 40581806 40582948 ZNF143 GTRD no Epithelial (MCF-7) 21758735
chr17 40581817 40583106 ZNF143 GTRD no Epithelial (MCF-7) 21758736
chr17 40581832 40583023 ZNF143 GTRD no Epithelial (MCF-7) 21758737
chr17 40581852 40582967 ZNF143 GTRD no Epithelial (MCF-7) 21758738
chr17 40581861 40583014 ZNF143 GTRD no Epithelial (MCF-7) 21758739
chr17 40581886 40583041 ZNF143 GTRD no Epithelial (MCF-7) 21758740
chr17 40581925 40583011 ZNF143 GTRD no Epithelial (MCF-7) 21758741
chr17 40581931 40582975 STAT3 GTRD no Blood (OCI-LY7) 21758742
chr17 40581949 40582921 ZNF143 GTRD no Epithelial (MCF-7) 21758743
chr17 40581968 40582801 ZNF143 GTRD no Epithelial (MCF-7) 21758744
chr17 40582001 40582893 ZNF143 GTRD no Epithelial (MCF-7) 21758745
chr17 40582019 40583116 ZNF143 GTRD no Epithelial (MCF-7) 21758746
chr17 40582043 40582882 ZNF143 GTRD no Epithelial (MCF-7) 21758747
chr17 40582044 40582955 ZNF143 GTRD no Epithelial (MCF-7) 21758748
chr17 40582056 40583090 ZNF143 GTRD no Epithelial (MCF-7) 21758749
chr17 40582078 40582784 ZNF143 GTRD no Epithelial (MCF-7) 21758750
chr17 40582086 40582757 ZNF143 GTRD no Epithelial (MCF-7) 21758751
chr17 40582099 40582796 ZNF143 GTRD no Epithelial (MCF-7) 21758752
chr17 40582122 40582729 ZNF143 GTRD no Epithelial (MCF-7) 21758753
chr17 40582125 40582719 ZNF143 GTRD no Epithelial (MCF-7) 21758754
chr17 40582139 40582780 ZNF143 GTRD no Epithelial (MCF-7) 21758755
chr17 40582142 40582697 ZNF143 GTRD no Epithelial (MCF-7) 21758756
chr17 40582142 40582742 ZNF143 GTRD no Epithelial (MCF-7) 21758757
chr17 40582144 40582793 ZNF143 GTRD no Epithelial (MCF-7) 21758758
chr17 40582153 40582737 ZNF143 GTRD no Epithelial (MCF-7) 21758759
chr17 40582175 40582639 ZNF143 GTRD no Epithelial (MCF-7) 21758760
chr17 40582179 40582815 ZNF143 GTRD no Epithelial (MCF-7) 21758761
chr17 40582193 40582736 ZNF143 GTRD no Epithelial (MCF-7) 21758762
chr17 40582197 40583012 ZNF143 GTRD no Epithelial (MCF-7) 21758763
chr17 40582199 40582731 ZNF143 GTRD no Epithelial (MCF-7) 21758764
chr17 40582211 40582823 ZNF143 GTRD no Epithelial (MCF-7) 21758765
chr17 40582214 40582585 ZNF143 GTRD no Epithelial (MCF-7) 21758766
chr17 40582246 40582617 ZNF143 GTRD no Epithelial (MCF-7) 21758767
chr17 40582264 40582276 NHLH1 JASPAR yes 54304552
chr17 40582264 40582277 ZBTB18 JASPAR yes 54304553
chr17 40582265 40582275 MSC JASPAR yes 54304554
chr17 40582265 40582275 TFAP4 JASPAR yes 54304555
chr17 40582266 40582676 ZNF143 GTRD no Epithelial (MCF-7) 21758768
Genes associated with rs1905338[chr17:40582273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More