EnhancerDB
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  3. rs190535329[chr12:46549716]
Enhancers that have rs190535329[chr12:46549716]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs190535329[chr12:46549716]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46549120 46549723 TCF7L2 GTRD no Colon (HCT116) 21540668
chr12 46549206 46550411 AR GTRD no Prostate (PC-3) 21540669
chr12 46549242 46550958 ZNF274 GTRD no Cervix (HeLa-S3) 21540670
chr12 46549399 46550814 ZBTB33 GTRD no Lung (A549) 21540671
chr12 46549402 46550594 ZNF274 GTRD no Cervix (HeLa-S3) 21540672
chr12 46549408 46550774 ZBTB33 GTRD no Lung (A549) 21540673
chr12 46549427 46551942 ZNF274 GTRD no Cervix (HeLa-S3) 21540674
chr12 46549443 46550338 ZNF274 GTRD no Cervix (HeLa-S3) 21540675
chr12 46549443 46552644 ZNF274 GTRD no Cervix (HeLa-S3) 21540676
chr12 46549452 46551820 ZNF274 GTRD no Cervix (HeLa-S3) 21540677
chr12 46549466 46550339 TCF7L2 GTRD no Colon (HCT116) 21540678
chr12 46549467 46550906 ZNF274 GTRD no Cervix (HeLa-S3) 21540679
chr12 46549473 46550925 ZNF274 GTRD no Cervix (HeLa-S3) 21540680
chr12 46549499 46550498 ZNF274 GTRD no Cervix (HeLa-S3) 21540681
chr12 46549509 46550450 ZBTB33 GTRD no Brain (SK-N-SH) 21540682
chr12 46549510 46552088 ZBTB33 GTRD no Lung (A549) 21540683
chr12 46549514 46550494 ZBTB33 GTRD no Brain (SK-N-SH) 21540684
chr12 46549515 46550177 ZNF274 GTRD no Cervix (HeLa-S3) 21540685
chr12 46549520 46550449 ZBTB33 GTRD no Brain (SK-N-SH) 21540686
chr12 46549522 46550530 ERG GTRD no Prostate (RWPE1) 21540687
chr12 46549562 46550286 ZBTB33 GTRD no Brain (SK-N-SH) 21540688
chr12 46549577 46550675 ZBTB33 GTRD no Lung (A549) 21540689
chr12 46549578 46550205 ZBTB33 GTRD no Lung (A549) 21540690
chr12 46549582 46550343 ZBTB33 GTRD no Lung (A549) 21540691
chr12 46549586 46550216 TCF7L2 GTRD no Colon (HCT116) 21540692
chr12 46549588 46550373 ZBTB33 GTRD no Brain (SK-N-SH) 21540693
chr12 46549616 46550291 ZBTB33 GTRD no Brain (SK-N-SH) 21540694
chr12 46549619 46550384 ZBTB33 GTRD no Brain (SK-N-SH) 21540695
chr12 46549638 46550318 ZBTB33 GTRD no Lung (A549) 21540696
chr12 46549646 46550118 ZBTB33 GTRD no Brain (SK-N-SH) 21540697
chr12 46549660 46550282 ZNF274 GTRD no Cervix (HeLa-S3) 21540698
chr12 46549673 46550311 ZNF274 GTRD no Cervix (HeLa-S3) 21540699
chr12 46549678 46550205 ZBTB33 GTRD no Brain (SK-N-SH) 21540700
chr12 46549692 46550205 ZBTB33 GTRD no Lung (A549) 21540701
chr12 46549700 46549716 POU4F3 JASPAR yes 120599094
chr12 46549702 46549716 POU4F1 JASPAR yes 120599095
chr12 46549702 46549717 HNF1A JASPAR yes 120599096
chr12 46549703 46549716 HNF1B JASPAR yes 120599097
chr12 46549703 46549717 POU4F1 JASPAR yes 120599098
chr12 46549703 46550234 ZNF274 GTRD no Cervix (HeLa-S3) 21540702
chr12 46549711 46549723 HNF1B JASPAR yes 120599099
Genes associated with rs190535329[chr12:46549716], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More