EnhancerDB
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  3. rs190566788[chr12:53373783]
Enhancers that have rs190566788[chr12:53373783]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190566788[chr12:53373783]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53372616 53373854 TCF7L2 GTRD no Colon (HCT116) 21548858
chr12 53373510 53374485 ZBTB33 GTRD no Lung (A549) 21548863
chr12 53373543 53374171 ZNF143 GTRD no Epithelial (MCF-7) 21548864
chr12 53373546 53374490 ZNF274 GTRD no Cervix (HeLa-S3) 21548865
chr12 53373551 53373970 ZNF143 GTRD no Epithelial (MCF-7) 21548866
chr12 53373574 53373943 ZNF274 GTRD no Liver (HepG2) 21548867
chr12 53373603 53373928 ZBTB33 GTRD no Lung (A549) 21548868
chr12 53373684 53374275 ZNF274 GTRD no Bone Marrow (K562) 21548869
chr12 53373691 53374095 ZNF274 GTRD no Liver (HepG2) 21548870
chr12 53373693 53374028 ZNF274 GTRD no Bone Marrow (K562) 21548871
chr12 53373694 53374209 ZNF274 GTRD no Liver (HepG2) 21548872
chr12 53373697 53374037 ZNF274 GTRD no Liver (HepG2) 21548873
chr12 53373697 53374051 ZNF274 GTRD no Liver (HepG2) 21548874
chr12 53373705 53374166 ZNF274 GTRD no Liver (HepG2) 21548875
chr12 53373734 53373986 ZNF274 GTRD no Liver (HepG2) 21548876
chr12 53373762 53373783 IRF1 JASPAR yes 120969719
chr12 53373768 53373783 MEF2C JASPAR yes 120969727
chr12 53373768 53373789 IRF1 JASPAR yes 120969728
chr12 53373769 53373784 MEF2A JASPAR yes 120969729
Genes associated with rs190566788[chr12:53373783], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More