EnhancerDB
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  3. rs190589627[chr1:25002943]
Enhancers that have rs190589627[chr1:25002943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs190589627[chr1:25002943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25002884 25003968 ZNF274 GTRD no Bone Marrow (K562) 21325291
chr1 25002929 25002947 RARA JASPAR yes 27516414
chr1 25002936 25002949 NR2F1 JASPAR yes 27516415
chr1 25002940 25002948 CREB1 JASPAR yes 27516416
Genes associated with rs190589627[chr1:25002943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More