EnhancerDB
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  3. rs190626181[chr1:40279559]
Enhancers that have rs190626181[chr1:40279559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs190626181[chr1:40279559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40279539 40279560 IRF1 JASPAR yes 28292216
chr1 40279544 40279559 FOXP1 JASPAR yes 28292218
chr1 40279545 40279560 FOXP1 JASPAR yes 28292219
chr1 40279546 40279561 FOXP1 JASPAR yes 28292220
chr1 40279547 40279562 FOXP1 JASPAR yes 28292221
Genes associated with rs190626181[chr1:40279559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More