EnhancerDB
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  3. rs190635342[chr1:23954985]
Enhancers that have rs190635342[chr1:23954985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs190635342[chr1:23954985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23954969 23954990 IRF1 JASPAR yes 27450051
chr1 23954971 23954986 FOXP1 JASPAR yes 27450052
chr1 23954974 23954989 MEF2A JASPAR yes 27450053
chr1 23954975 23954990 FOXP1 JASPAR yes 27450054
chr1 23954975 23954990 MEF2C JASPAR yes 27450055
chr1 23954975 23954996 IRF1 JASPAR yes 27450056
chr1 23954976 23954988 FOXC2 JASPAR yes 27450057
chr1 23954976 23954988 MEF2A JASPAR yes 27450058
chr1 23954976 23954988 MEF2B JASPAR yes 27450059
chr1 23954976 23954988 MEF2D JASPAR yes 27450060
chr1 23954977 23954987 MEF2A JASPAR yes 27450061
chr1 23954979 23954991 IRF1 JASPAR yes 27450063
chr1 23954980 23954995 MEF2A JASPAR yes 27450064
chr1 23954981 23954996 MEF2C JASPAR yes 27450065
chr1 23954982 23954994 MEF2A JASPAR yes 27450066
chr1 23954982 23954994 MEF2B JASPAR yes 27450067
chr1 23954982 23954994 MEF2D JASPAR yes 27450068
chr1 23954983 23954993 MEF2A JASPAR yes 27450069
chr1 23954984 23954988 YY1 TRANSFAC yes 27450070
Genes associated with rs190635342[chr1:23954985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More