EnhancerDB
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  3. rs190659486[chr17:80461365]
Enhancers that have rs190659486[chr17:80461365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs190659486[chr17:80461365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80461008 80461513 TCF7L2 GTRD no Colon (HCT116) 21800690
chr17 80461157 80462482 TCF7L2 GTRD no Colon (HCT116) 21800691
chr17 80461211 80462987 TCF7L2 GTRD no Colon (HCT116) 21800692
chr17 80461280 80461752 TCF7L2 GTRD no Colon (HCT116) 21800693
chr17 80461290 80462484 TCF7L2 GTRD no Colon (HCT116) 21800694
chr17 80461353 80461367 PLAG1 JASPAR yes 56368635
chr17 80461355 80461370 TFAP2C JASPAR yes 56368637
chr17 80461360 80461365 TFAP2A TRANSFAC yes 56368638
chr17 80461360 80461366 MZF1 JASPAR yes 56368639
chr17 80461361 80461371 SP1 JASPAR yes 56368640
Genes associated with rs190659486[chr17:80461365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More