EnhancerDB
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  3. rs190801562[chr2:39325888]
Enhancers that have rs190801562[chr2:39325888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs190801562[chr2:39325888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39325881 39325894 ZBTB18 JASPAR yes 73181714
chr2 39325883 39325893 ID4 JASPAR yes 73181715
chr2 39325883 39325893 TCF3 JASPAR yes 73181716
chr2 39325883 39325893 TCF4 JASPAR yes 73181717
chr2 39325885 39325894 ZEB1 JASPAR yes 73181718
chr2 39325886 39325894 TBX5 JASPAR yes 73181719
Genes associated with rs190801562[chr2:39325888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More