EnhancerDB
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  3. rs190806353[chr12:124865005]
Enhancers that have rs190806353[chr12:124865005]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124862183 124886902 enh2671
Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs190806353[chr12:124865005]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124861015 124865473 ZNF274 GTRD no Bone Marrow (K562) 108067419
chr12 124862732 124865019 TCF7L2 GTRD no Colon (HCT116) 108067438
chr12 124862982 124865064 TCF7L2 GTRD no Colon (HCT116) 108067441
chr12 124864543 124865083 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108067447
chr12 124864617 124865101 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108067448
chr12 124864634 124865174 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108067449
chr12 124864648 124865092 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21580387
chr12 124864648 124865092 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108067450
chr12 124864648 124865319 POLR2A UCSC Txn Factor no Conserved 108067451
chr12 124864679 124865089 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108067452
chr12 124864744 124865284 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108067453
chr12 124864782 124865064 FOS UCSC Txn Factor no Conserved 108067454
chr12 124864818 124865318 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108067455
chr12 124864948 124865502 ZNF274 GTRD no Bone Marrow (K562) 108067456
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 21580388
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067457
chr12 124864989 124866737 ZNF143 GTRD no Epithelial (MCF-7) 108067458
chr12 124864992 124865006 PLAG1 JASPAR yes 82494448
chr12 124864992 124865006 PLAG1 JASPAR yes 124371740
chr12 124865005 124865014 HIC2 JASPAR yes 124371741
Genes associated with rs190806353[chr12:124865005], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More